Hepatitis B Virus Requlatory Sequence Database (HBVRegDB)

           

A service provided by HBVRegDB to allow searching of specific databases. It may be used to reanalyse precomputed matches provided.

Choose program to use and HBVRegDB related protein database to search (link to nucleotide) :

Program Database description

Enter sequence below in FASTA format

Or load it from disk

Set subsequence: From         To


The query sequence is not filtered for low complexity regions by default.
Filter Low complexity Mask for lookup table only

Expect    Matrix Perform ungapped alignment

Query Genetic Codes (blastx only)

Database Genetic Codes (tblast[nx] only)

Frame shift penalty for blastx

Other advanced options:     


Graphical Overview    Alignment view
Descriptions    Alignments Color schema


Comments and suggestions to: chrisb @ sanger.otago.ac.nz

Page last modified: 20/10/2012