>NC_017625 NC_017625.1 Escherichia coli DH1 chromosome, complete genome. Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ============================= ====== 1005300 29 100.0 32 NNNNNNNNNN ............................. CTTTCGCAGACGCGCGGCGATACGCTCACGCA 1005361 29 100.0 32 NNNNNNNNNN ............................. CAGCCGAAGCCAAAGGTGATGCCGAACACGCT 1005422 29 100.0 32 NNNNNNNNNN ............................. GGCTCCCTGTCGGTTGTAATTGATAATGTTGA 1005483 29 100.0 33 NNNNNNNNNN ............................. TTTGGATCGGGTCTGGAATTTCTGAGCGGTCGC 1005545 29 100.0 33 NNNNNNNNNN ............................. CGAATCGCGCATACCCTGCGCGTCGCCGCCTGC 1005607 29 100.0 32 NNNNNNNNNN ............................. TCAGCTTTATAAATCCGGAGATACGGAAACTA 1005668 29 100.0 32 NNNNNNNNNN ............................. GACTCACCCCGAAAGAGATTGCCAGCCAGCTT 1005729 29 100.0 32 NNNNNNNNNN ............................. CTGCTGGAGCTGGCTGCAAGGCAAGCCGCCCA 1005790 29 100.0 32 NNNNNNNNNN ............................. GGGGGCGCATGACCGTAAACATTATCCCCCGG 1005851 29 100.0 32 NNNNNNNNNN ............................. GGAGTTCAGACATAGGTGGAATGATGGACTAC 1005912 29 100.0 32 NNNNNNNNNN ............TT............... CCCGGTAGCCAGGTTTGCAACGCCTGAACCGA 1005973 29 100.0 32 NNNNNNNNNN .................A........... GCAACGACGGTGAGATTTCACGCCTGACGCTG 1006034 29 100.0 0 NNNNNNNNNN .T.........AT................ NNNNNNNNNN ========== ====== ====== ====== ========== ============================= 13 29 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 0.5/0.5 # Secondary structural analysis prediction: F [-13.40,-12.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # # Final direction: F [1.92,0 Confidence: HIGH] >NC_017625 NC_017625.1 Escherichia coli DH1 chromosome, complete genome. Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ============================ ====== 979356 28 100.0 33 TATGTTTAGA ............................ GGCAAAAACCGGGCAATCGCAAAAAGGCGTAAT 979417 28 100.0 33 AAGGCGTAAT ............................ TGTGTTTGCGGCATTAACGCTCACCAGCATTTC 979478 28 100.0 33 CCAGCATTTC ............................ GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA 979539 28 100.0 33 TGCAGAGCCA ............................ GAGCAGATACACGGCTTTGTATTCCGTGCGCCC 979600 28 100.0 33 CCGTGCGCCC ............................ GAATAGCAATAGTCCATAGATTTGCGAAAACAG 979661 28 100.0 33 GCGAAAACAG ............................ GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC 979722 28 96.4 CCGTTCTGTC .A.......................... ACCATATAAC ========== ====== ====== ====== ========== ============================ 7 28 33 GTGTTCCCCGCGCCAGCGGGGATAAACC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 96% identity] Score: 0.5/0.5 # Secondary structural analysis prediction: F [-13.40,-12.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # # Final direction: F [1.65,0 Confidence: HIGH]